Difference: BatchDetails (7 vs. 8)

Revision 82014-03-07 - WilliamSeligman

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META TOPICPARENT name="Condor"

Details of running condor at Nevis

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setup without initialization

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The Nevis setup command requires initialization. When you login, this initialization is done for you; look at your ~/.profile file (~/.cshrc if you use tcsh). You have to explicitly include this line if you're submitting a batch job:
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The Nevis setup command requires initialization. When you login, this initialization is done for you; look at your ~/.profile file (~/.cshrc if you use tcsh). You have to explicitly include this line if you're submitting a batch job and you're using setup
 
shopt -s expand_aliases # This line is only necessary if you're using bash
source /usr/nevis/adm/nevis-init.sh
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  Replace .sh with .csh if you use tcsh.
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Note: If you are using a software framework with its own copy of ROOT or Geant4, you probably don't need to do this. This includes ATLAS Athena and MicroBooNE's LArSoft. Those packages have their own setup scripts, and you should use them instead.
 

Submitting batch jobs

Memory limits

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The heterogenous cluster

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Not all machines in the farm are the same; they have different amounts of memory, disk space, and occasionally even installed libraries. Make sure you use the standardized compiler to compile your programs.
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Not all machines in the farm are the same; they have different amounts of memory, disk space, and occasionally even installed libraries. The standardized compiler can help solve this problem.
 
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You'll also want to set up the standard Nevis environment explicitly in your jobs. If you look at the example described below, you'll see that the shell scripts all contain command such as:
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You may also want to set up the standard Nevis environment explicitly in your jobs. If you look at the example described below, you'll see that the shell scripts all contain command such as:
 
# If you're using bash:
shopt -s expand_aliases
source /usr/nevis/adm/nevis-init.sh
 
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